Catherine M. Stein, PhD
firstname.lastname@example.org | 216.368.5631 | Wolstein Research Building, 1316
Ph.D. Epidemiology and Biostatistics, Case Western Reserve University. Cleveland, OH. 2004. Dissertation: Genetic and environmental influences on tuberculosis susceptibility.
Dr. Stein’s research focuses on complex genetic disorders. Her primary research focus is in the study of genetic and environmental susceptibility to tuberculosis. She is the Genetics Working Group Leader of the Tuberculosis Research Unit and co-PI of the Kawempe Community Health Study, a large household contact study of TB. She also conducts collaborative research in HIV, Rift Valley Fever Virus, and speech-sound disorder. In addition, she is interested in applying multivariate methods, particularly structural equation models, to the joint analysis of related traits, genes, and clinical covariates.
Ongoing Research Projects
Tuberculosis: Examining the influence of epidemiological risk factors, host genetics, microbial genetics, and host immunology on thd development of latent M. tuberculosis infection and active TB disease
Speech-sound disorder: Modeling the relationships of cognitive domains underlying speech-sound disorder, how these predict later outcomes in reading deficiency, and mapping genes underlying both these clinical traits and endophenotypes
Structural Equation Modeling in Family Data: We have released ‘strum’ software, an R package that implements a generalized framework to conduct SEM analyses in family data based on methodology developed by Dr. Nathan Morris
- Martinez, L, Shen, Y, Handel, A, Chakraburty, S, Stein, CM, Malone, LL, Boom, WH, Quinn, FD, Joloba, ML, Whalen, CC, Zalwango, S. Effectiveness of WHO's pragmatic screening algorithm for child contacts of tuberculosis cases in resource-constrained settings: a prospective cohort study in Uganda. Lancet Respir Med 2017; : . PubMed PMID:29273539 .
- Martinez, L, Handel, A, Shen, Y, Chakraburty, S, Quinn, FD, Stein, CM, Malone, LL, Zalwango, S, Whalen, CC. A Prospective Validation of a Clinical Algorithm to Detect Tuberculosis in Child Contacts. Am. J. Respir. Crit. Care Med. 2017; : . PubMed PMID:29035095 .
- Grover, S, Del Greco M, F, Stein, CM, Ziegler, A. Mendelian Randomization. Methods Mol. Biol. 2017; 1666 : 581-628. PubMed PMID:28980266 .
- Stein, CM, Morris, NJ, Hall, NB, Nock, NL. Structural Equation Modeling. Methods Mol. Biol. 2017; 1666 : 557-580. PubMed PMID:28980265 .
- Morris, NJ, Stein, CM. Model-Free Linkage Analysis of a Quantitative Trait. Methods Mol. Biol. 2017; 1666 : 327-342. PubMed PMID:28980253 .
- Bark, CM, Manceur, AM, Malone, LL, Nsereko, M, Okware, B, Mayanja, HK, Joloba, ML, Rajotte, I, Mentinova, M, Kay, P, Lo, S, Tremblay, P, Stein, CM, Boom, WH, Paramithiotis, E. Identification of Host Proteins Predictive of Early Stage Mycobacterium tuberculosis Infection. EBioMedicine 2017; 21 : 150-157. PubMed PMID:28655597 PubMed Central PMC5514433.
- Sobota, RS, Stein, CM, Kodaman, N, Maro, I, Wieland-Alter, W, Igo, RP Jr, Magohe, A, Malone, LL, Chervenak, K, Hall, NB, Matee, M, Mayanja-Kizza, H, Joloba, M, Moore, JH, Scott, WK, Lahey, T, Boom, WH, von Reyn, CF, Williams, SM, Sirugo, G. A chromosome 5q31.1 locus associates with tuberculin skin test reactivity in HIV-positive individuals from tuberculosis hyper-endemic regions in east Africa. PLoS Genet. 2017; 13 (6): e1006710. PubMed PMID:28628665 PubMed Central PMC5495514.
- Seshadri, C, Sedaghat, N, Campo, M, Peterson, G, Wells, RD, Olson, GS, Sherman, DR, Stein, CM, Mayanja-Kizza, H, Shojaie, A, Boom, WH, Hawn, TR, Tuberculosis Research Unit (TBRU). Transcriptional networks are associated with resistance to Mycobacterium tuberculosis infection. PLoS ONE 2017; 12 (4): e0175844. PubMed PMID:28414762 PubMed Central PMC5393882.
- Song, YE, Morris, NJ, Stein, CM. Structural equation modeling with latent variables for longitudinal blood pressure traits using general pedigrees. BMC Proc 2016; 10 (Suppl 7): 303-307. PubMed PMID:27980653 PubMed Central PMC5133482.
- Mehlotra, RK, Hall, NB, Willie, B, Stein, CM, Weinberg, A, Zimmerman, PA, Vernon, LT. Associations of Toll-Like Receptor and β-Defensin Polymorphisms with Measures of Periodontal Disease (PD) in HIV+ North American Adults: An Exploratory Study. PLoS ONE 2016; 11 (10): e0164075. PubMed PMID:27727278 PubMed Central PMC5058471.